
     **************************************               **************
     **** CURVES+ Version 2.6  04/2014 ****               *  30 Jun 14 *
     **************************************               **************


  FILE : avg_0-10us.pdb                    ftop :                                 
  LIS  : curves-info                       LIB  : standard                        
  lig  :                                   ibld :                                 
  sol  :                                   back : P                               

  wback :  2.90  wbase :  3.50

  isym  :     1  itst  :     0  itnd  :     0  itdel :     1  naxlim:     0

  circ  :     F  line  :     F  zaxe  :     F  fit   :     T  test  :     F
  ions  :     F  refo  :     F  axfrm :     F  frames:     F


  LS fitting of standard bases ...RMS max =  0.390

  Strands =    2 Atoms =   732 Units =    36 H removed =   407

  Combined strands have   18 levels ...

  Strand  1 has  18 bases (5'-3'): GCACGAACGAACGAACGC
  Strand  2 has  18 bases (3'-5'): CGTGCTTGCTTGCTTGCG

  (A) BP-Axis        Xdisp   Ydisp   Inclin    Tip  Ax-bend

    1) G   1-C  36   -0.76   -0.12     8.6     2.7     ---
    2) C   2-G  35   -0.99    0.15     8.8     0.1     0.9
    3) A   3-T  34   -1.01    0.20     9.6     2.1     1.1
    4) C   4-G  33   -1.06   -0.51     8.1    -2.5     1.0
    5) G   5-C  32   -1.39   -0.29     8.2     3.5     1.0
    6) A   6-T  31   -1.59    0.04     9.0     1.9     0.7
    7) A   7-T  30   -1.51    0.25     7.0    -0.6     0.4
    8) C   8-G  29   -1.34   -0.21     5.6    -3.4     0.1
    9) G   9-C  28   -1.36   -0.06     7.1     4.6     0.4
   10) A  10-T  27   -1.51    0.09     9.1     2.8     0.3
   11) A  11-T  26   -1.47    0.28     7.2    -0.5     0.3
   12) C  12-G  25   -1.24   -0.11     5.6    -3.5     0.3
   13) G  13-C  24   -1.18    0.04     6.8     4.2     0.1
   14) A  14-T  23   -1.30    0.21     8.2     2.5     0.1
   15) A  15-T  22   -1.20    0.39     5.9    -0.1     0.4
   16) C  16-G  21   -0.95   -0.01     5.0    -2.7     0.4
   17) G  17-C  20   -0.69   -0.02     5.6     2.5     0.7
   18) C  18-G  19   -0.32   -0.10     7.9     0.3     0.8

       Average:      -1.16    0.01     7.4     0.8  Total bend =     4.0 (  1 to  18)

  (B) Intra-BP parameters

  Strands 1-2       Shear  Stretch Stagger  Buckle  Propel Opening

    1) G   1-C  36   -0.15   -0.15   -0.61    -2.3     1.8     4.1
    2) C   2-G  35    0.00   -0.17    0.08     2.0    -6.5     1.2
    3) A   3-T  34    0.07   -0.13    0.10     2.3   -12.8     2.8
    4) C   4-G  33   -0.03   -0.11    0.10     3.5    -9.0     1.3
    5) G   5-C  32    0.02   -0.11    0.00     5.9    -9.1     1.3
    6) A   6-T  31    0.12   -0.08   -0.05     3.7   -17.4     3.1
    7) A   7-T  30    0.12   -0.05    0.14     3.3   -16.2     2.4
    8) C   8-G  29   -0.02   -0.05    0.11     1.9    -9.8     1.5
    9) G   9-C  28    0.02   -0.07   -0.01     5.3    -8.5     1.3
   10) A  10-T  27    0.12   -0.05   -0.05     4.0   -17.0     3.0
   11) A  11-T  26    0.11   -0.05    0.15     3.5   -16.2     2.4
   12) C  12-G  25   -0.02   -0.05    0.11     1.8    -9.7     1.4
   13) G  13-C  24    0.03   -0.09    0.00     6.3    -8.1     1.2
   14) A  14-T  23    0.13   -0.09   -0.02     5.9   -16.9     2.9
   15) A  15-T  22    0.11   -0.10    0.19     5.8   -17.4     2.5
   16) C  16-G  21    0.03   -0.12    0.13     2.5   -14.6     1.6
   17) G  17-C  20    0.02   -0.17    0.15    -2.8    -6.8     2.1
   18) C  18-G  19    0.11   -0.16   -0.20    -0.6     0.7     3.7

       Average:       0.04   -0.10    0.02     2.9   -10.8     2.2

  (C) Inter-BP       Shift   Slide    Rise    Tilt    Roll   Twist   H-Ris   H-Twi

    1) G   1/C   2   -0.23    0.19    3.04    -1.3     2.6    30.9    3.03    31.2
    2) C   2/A   3   -0.21   -0.11    3.24    -0.3     8.3    33.0    3.17    33.7
    3) A   3/C   4    0.08   -0.67    3.28    -0.7     1.1    30.4    3.12    30.5
    4) C   4/G   5    0.05   -0.06    3.22     0.8    10.5    32.1    3.18    32.9
    5) G   5/A   6   -0.20   -0.28    3.40    -0.2     3.2    33.8    3.34    34.0
    6) A   6/A   7   -0.17   -0.43    3.29    -2.4     2.1    34.4    3.20    34.5
    7) A   7/C   8    0.16   -0.77    3.38    -0.3     0.7    31.5    3.28    31.5
    8) C   8/G   9    0.05   -0.12    3.24     1.0    10.8    31.0    3.22    31.6
    9) G   9/A  10   -0.26   -0.24    3.40    -0.5     3.2    33.7    3.34    33.9
   10) A  10/A  11   -0.19   -0.44    3.30    -2.5     2.0    34.3    3.20    34.5
   11) A  11/C  12    0.13   -0.77    3.40    -0.3     0.8    31.5    3.28    31.6
   12) C  12/G  13    0.03   -0.09    3.21     1.0    10.8    30.8    3.19    31.3
   13) G  13/A  14   -0.30   -0.19    3.34    -0.6     2.9    33.6    3.30    33.9
   14) A  14/A  15   -0.18   -0.37    3.25    -2.6     1.7    34.6    3.18    34.8
   15) A  15/C  16    0.07   -0.74    3.36    -0.2     0.2    31.8    3.28    31.8
   16) C  16/G  17    0.09   -0.10    3.36    -0.1     8.0    34.8    3.35    35.1
   17) G  17/C  18    0.29    0.20    3.11     1.0     2.3    31.4    3.10    31.6

       Average:      -0.05   -0.29    3.28    -0.5     4.2    32.6    3.22    32.8

  (D) Backbone Parameters

   Strand 1     Alpha  Beta   Gamma  Delta  Epsil  Zeta   Chi    Phase  Ampli  Puckr  

    1) G   1     ----   ----   69.5  121.2 -147.5 -127.2 -106.8  141.0   34.6  C1'ex
    2) C   2    -84.2  158.2   65.7  117.5 -170.4  -98.6 -117.7  131.1   29.7  C1'ex
    3) A   3    -76.3  173.0   55.2  126.8 -171.0  -96.9 -112.2  143.2   30.7  C1'ex
    4) C   4    -70.6  166.7   57.3  110.5 -164.8  -96.5 -123.5  112.7   33.1  C1'ex
    5) G   5    -75.3  171.0   55.6  131.3 -154.1 -124.8 -108.0  147.9   33.5  C2'en
    6) A   6    -72.0  166.5   54.1  125.0 -170.8  -99.7 -117.3  139.5   29.7  C1'ex
    7) A   7    -69.7  172.3   55.0  123.2 -173.2  -92.7 -117.1  136.0   31.1  C1'ex
    8) C   8    -69.6  169.1   57.2  110.0 -165.9  -92.2 -125.6  111.2   32.4  C1'ex
    9) G   9    -75.4  172.0   55.3  130.8 -150.5 -129.8 -107.3  146.1   34.1  C2'en
   10) A  10    -72.6  166.1   53.9  126.0 -170.5 -100.3 -116.7  141.3   29.7  C1'ex
   11) A  11    -69.9  172.1   54.9  123.2 -173.1  -92.9 -117.4  135.6   31.1  C1'ex
   12) C  12    -69.4  169.2   57.0  109.9 -165.7  -91.8 -125.7  110.7   32.3  C1'ex
   13) G  13    -75.8  172.1   55.4  131.2 -147.1 -134.1 -106.3  146.2   34.4  C2'en
   14) A  14    -73.3  165.5   53.8  127.2 -169.5 -102.3 -115.1  143.5   29.8  C1'ex
   15) A  15    -70.3  171.6   55.1  125.4 -172.5  -96.0 -115.2  139.7   31.6  C1'ex
   16) C  16    -68.4  167.7   57.8  114.5 -168.0  -96.0 -124.3  119.1   33.9  C1'ex
   17) G  17    -73.2  174.6   54.3  127.4 -165.2  -99.4 -114.8  143.5   31.1  C1'ex
   18) C  18    -75.5  168.2   58.9  116.4   ----   ---- -120.8  120.6   31.6  C1'ex

   Strand 2     Alpha  Beta   Gamma  Delta  Epsil  Zeta   Chi    Phase  Ampli  Puckr  

    1) C  36    -76.8  167.1   62.5  115.7   ----   ---- -122.8  123.4   29.5  C1'ex
    2) G  35    -73.8  172.0   55.5  122.8 -161.8 -106.7 -114.5  134.5   32.9  C1'ex
    3) T  34    -69.5  169.7   58.4  113.7 -168.9  -88.9 -126.2  117.2   31.6  C1'ex
    4) G  33    -71.4  171.7   56.7  126.7 -172.7 -100.8 -116.3  143.0   31.3  C1'ex
    5) C  32    -69.2  169.9   57.7  112.2 -169.6  -96.0 -124.7  113.8   30.3  C1'ex
    6) T  31    -67.5  170.1   58.8  113.3 -173.7  -89.2 -123.9  117.0   32.8  C1'ex
    7) T  30    -68.5  170.5   58.4  116.4 -174.4  -90.0 -127.5  123.6   32.4  C1'ex
    8) G  29    -72.1  170.5   57.1  127.1 -172.8 -104.6 -115.7  143.6   32.1  C1'ex
    9) C  28    -69.6  169.6   57.8  112.1 -168.7  -96.2 -123.7  113.6   30.0  C1'ex
   10) T  27    -67.7  170.1   58.7  112.9 -173.3  -88.7 -123.8  116.4   32.6  C1'ex
   11) T  26    -68.5  170.3   58.3  116.3 -174.3  -89.8 -127.5  123.3   32.4  C1'ex
   12) G  25    -71.9  170.6   57.0  127.3 -173.0 -104.8 -115.1  144.2   32.1  C2'en
   13) C  24    -69.6  169.2   58.2  111.0 -169.0  -95.5 -124.2  111.8   29.7  C1'ex
   14) T  23    -67.4  170.2   58.8  113.0 -173.6  -88.4 -123.6  116.7   32.6  C1'ex
   15) T  22    -68.2  171.1   59.3  114.6 -174.8  -90.2 -128.3  120.7   33.5  C1'ex
   16) G  21    -76.4  170.4   56.9  128.4 -176.5  -98.2 -115.2  146.6   32.0  C2'en
   17) C  20    -83.1  157.4   64.1  119.9 -169.5 -102.7 -116.0  133.2   30.7  C1'ex
   18) G  19     ----   ----   67.4  122.3 -139.7 -139.3 -101.4  141.5   35.3  C1'ex

  (E) Groove parameters

   Level           W12     D12     W21     D21

    1.5                                       
    2.0  C   2                                
    2.5                                       
    3.0  A   3     7.4     3.9                
    3.5            7.3     4.1                
    4.0  C   4     7.4     4.3                
    4.5            7.5     4.5    11.7     6.8
    5.0  G   5     7.2     4.5    11.9     6.4
    5.5            6.7     4.6    12.3     6.6
    6.0  A   6     6.3     4.6    12.7     6.4
    6.5            6.2     4.6    12.8     6.4
    7.0  A   7     6.2     4.5    12.8     6.5
    7.5            6.7     4.5    12.4     6.4
    8.0  C   8     7.3     4.4    12.0     6.8
    8.5            7.6     4.6    11.6     7.1
    9.0  G   9     7.4     4.5    11.9     6.8
    9.5            7.0     4.6    12.4     6.8
   10.0  A  10     6.5     4.6    12.9     6.5
   10.5            6.3     4.6    13.0     6.4
   11.0  A  11     6.3     4.5    13.0     6.4
   11.5            6.7     4.5    12.6     6.4
   12.0  C  12     7.3     4.4    12.0     6.5
   12.5            7.6     4.6    11.7     7.0
   13.0  G  13     7.4     4.5    12.0     7.0
   13.5            6.9     4.6    12.2     6.7
   14.0  A  14     6.3     4.6    12.5     6.4
   14.5            6.0     4.8    12.5     6.1
   15.0  A  15     5.6     4.5                
   15.5            5.8     4.6                
   16.0  C  16     6.2     4.5                
   16.5                                       
   17.0  G  17                                
   17.5                                       
