parm ../../aa/tip3p/ff12sb/run1/build/noWAt.topo.hmr [apa]
parm ../../ag/tip3p/ff12sb/run1/build/noWAt.topo.hmr [apg]
parm ../../ga/tip3p/ff12sb/run1/build/noWAt.topo.hmr [gpa]
parm ../../gg/tip3p/ff12sb/run1/build/noWAt.topo.hmr [gpg]
parm ../../ac/tip3p/ff12sb/run1/build/noWAt.topo.hmr [apc]
parm ../../au/tip3p/ff12sb/run1/build/noWAt.topo.hmr [apu]
parm ../../gc/tip3p/ff12sb/run1/build/noWAt.topo.hmr [gpc]
parm ../../gu/tip3p/ff12sb/run1/build/noWAt.topo.hmr [gpu]
parm ../../ca/tip3p/ff12sb/run1/build/noWAt.topo.hmr [cpa]
parm ../../cg/tip3p/ff12sb/run1/build/noWAt.topo.hmr [cpg]
parm ../../ua/tip3p/ff12sb/run1/build/noWAt.topo.hmr [upa]
parm ../../ug/tip3p/ff12sb/run1/build/noWAt.topo.hmr [upg]
parm ../../cc/tip3p/ff12sb/run1/build/noWAt.topo.hmr [cpc]
parm ../../cu/tip3p/ff12sb/run1/build/noWAt.topo.hmr [cpu]
parm ../../uc/tip3p/ff12sb/run1/build/noWAt.topo.hmr [upc]
parm ../../uu/tip3p/ff12sb/run1/build/noWAt.topo.hmr [upu]


trajin ../../ca/cluster-all/km-6/ctraj.c0 parm [cpa]
trajin ../../ca/cluster-all/km-6/ctraj.c1 parm [cpa]
trajin ../../ca/cluster-all/km-6/ctraj.c2 parm [cpa]
trajin ../../ca/cluster-all/km-6/ctraj.c3 parm [cpa]
trajin ../../ca/cluster-all/km-6/ctraj.c4 parm [cpa]
trajin ../../ca/cluster-all/km-6/ctraj.c5 parm [cpa]

trajin ../../cg/cluster-1-1/km-6-bbC2/ctraj.c0 parm [cpg]
trajin ../../cg/cluster-1-1/km-6-bbC2/ctraj.c1 parm [cpg]
trajin ../../cg/cluster-1-1/km-6-bbC2/ctraj.c2 parm [cpg]
trajin ../../cg/cluster-1-1/km-6-bbC2/ctraj.c3 parm [cpg]
trajin ../../cg/cluster-1-1/km-6-bbC2/ctraj.c4 parm [cpg]
trajin ../../cg/cluster-1-1/km-6-bbC2/ctraj.c5 parm [cpg]

trajin ../../ua/cluster-1-1/km-7/ctraj.c0 parm [upa]
trajin ../../ua/cluster-1-1/km-7/ctraj.c1 parm [upa]
trajin ../../ua/cluster-1-1/km-7/ctraj.c2 parm [upa]
trajin ../../ua/cluster-1-1/km-7/ctraj.c3 parm [upa]
trajin ../../ua/cluster-1-1/km-7/ctraj.c4 parm [upa]
trajin ../../ua/cluster-1-1/km-7/ctraj.c5 parm [upa]
trajin ../../ua/cluster-1-1/km-7/ctraj.c6 parm [upa]

trajin ../../ug/cluster-1-1/km-6/ctraj.c0 parm [upg]
trajin ../../ug/cluster-1-1/km-6/ctraj.c1 parm [upg]
trajin ../../ug/cluster-1-1/km-6/ctraj.c2 parm [upg]
trajin ../../ug/cluster-1-1/km-6/ctraj.c3 parm [upg]
trajin ../../ug/cluster-1-1/km-6/ctraj.c4 parm [upg]
trajin ../../ug/cluster-1-1/km-6/ctraj.c5 parm [upg]

trajin ../../cc/cluster-all/km-5/ctraj.c0 parm [cpc]
trajin ../../cc/cluster-all/km-5/ctraj.c1 parm [cpc]
trajin ../../cc/cluster-all/km-5/ctraj.c2 parm [cpc]
trajin ../../cc/cluster-all/km-5/ctraj.c3 parm [cpc]
trajin ../../cc/cluster-all/km-5/ctraj.c4 parm [cpc]

trajin ../../cu/cluster-1-1/km-5-bbC2/ctraj.c0 parm [cpu]
trajin ../../cu/cluster-1-1/km-5-bbC2/ctraj.c1 parm [cpu]
trajin ../../cu/cluster-1-1/km-5-bbC2/ctraj.c2 parm [cpu]
trajin ../../cu/cluster-1-1/km-5-bbC2/ctraj.c3 parm [cpu]
trajin ../../cu/cluster-1-1/km-5-bbC2/ctraj.c4 parm [cpu]

trajin ../../uc/cluster-1-1/km-5/ctraj.c0 parm [upc]
trajin ../../uc/cluster-1-1/km-5/ctraj.c1 parm [upc]
trajin ../../uc/cluster-1-1/km-5/ctraj.c2 parm [upc]
trajin ../../uc/cluster-1-1/km-5/ctraj.c3 parm [upc]
trajin ../../uc/cluster-1-1/km-5/ctraj.c4 parm [upc]

trajin ../../uu/cluster-all/km-5/ctraj.c0 parm [upu]
trajin ../../uu/cluster-all/km-5/ctraj.c1 parm [upu]
trajin ../../uu/cluster-all/km-5/ctraj.c2 parm [upu]
trajin ../../uu/cluster-all/km-5/ctraj.c3 parm [upu]
trajin ../../uu/cluster-all/km-5/ctraj.c4 parm [upu]

distance dist3 :1@HO5' :1@O2
dihedral c1 :1@O4' :1@C1' :1@N1  :1@C2 type chi
run
hist c1,-180,180,0.5 dist3,0,10,0.01 out 2dhist_c1_dist3-py.gnu norm
